Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHGB3Q9Y5G1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHGB3Q9Y5G1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHGB3Q9Y5G1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 VENTXP7-201ENST00000475503 772 ntBASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB3Q9Y5G1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 AC005104.2-201ENST00000427818 678 ntBASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 RN7SL606P-201ENST00000472779 293 ntBASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 AC111152.3-201ENST00000569699 673 ntBASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 AC016396.2-201ENST00000562575 1417 ntBASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGB3Q9Y5G1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 COX5BP2-201ENST00000392354 334 ntBASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 AL592071.1-201ENST00000611956 408 ntBASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB3Q9Y5G1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms