Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 AL596442.2-201ENST00000610240 980 ntBASIC23.49■■□□□ 1.35
NINLQ9Y2I6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
NINLQ9Y2I6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 AP002472.1-201ENST00000577490 586 ntBASIC23.48■■□□□ 1.35
NINLQ9Y2I6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 AC092902.6-201ENST00000641783 218 ntBASIC23.48■■□□□ 1.35
NINLQ9Y2I6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NINLQ9Y2I6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 AP000344.2-201ENST00000512987 629 ntBASIC23.47■■□□□ 1.35
NINLQ9Y2I6 AL031432.2-201ENST00000566714 459 ntBASIC23.47■■□□□ 1.35
NINLQ9Y2I6 AL928711.1-201ENST00000570165 459 ntBASIC23.47■■□□□ 1.35
NINLQ9Y2I6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NINLQ9Y2I6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 AC093525.9-201ENST00000624961 1746 ntBASIC23.46■■□□□ 1.35
NINLQ9Y2I6 STOM-202ENST00000347359 870 ntTSL 2 BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 AC140658.5-201ENST00000438532 169 ntBASIC23.46■■□□□ 1.35
NINLQ9Y2I6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
NINLQ9Y2I6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
NINLQ9Y2I6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
NINLQ9Y2I6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
NINLQ9Y2I6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC23.45■■□□□ 1.35
NINLQ9Y2I6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
NINLQ9Y2I6 AL133373.2-201ENST00000623187 2828 ntBASIC23.45■■□□□ 1.34
NINLQ9Y2I6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NINLQ9Y2I6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC23.45■■□□□ 1.34
NINLQ9Y2I6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NINLQ9Y2I6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
NINLQ9Y2I6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NINLQ9Y2I6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
NINLQ9Y2I6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms