Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 AC069262.1-201ENST00000539058 672 ntBASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 AC004449.1-201ENST00000564240 433 ntBASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 AC005498.2-205ENST00000593218 784 ntBASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 AC012645.4-201ENST00000610691 1061 ntBASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 AP000867.4-201ENST00000641616 219 ntBASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HPS5Q9UPZ3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 KRT18P27-201ENST00000427733 1299 ntBASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 AC109462.3-201ENST00000573934 613 ntBASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
HPS5Q9UPZ3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 HLA-V-201ENST00000429037 534 ntBASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 AL139327.4-201ENST00000612362 153 ntBASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 Z92544.3-201ENST00000624747 417 ntBASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HPS5Q9UPZ3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.53■□□□□ 0.88
HPS5Q9UPZ3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms