Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 SIRPAP1-201ENST00000448467 1770 ntBASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 UNC93B6-202ENST00000528242 690 ntBASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 FAM197Y3-203ENST00000618346 717 ntBASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 MIR1199-201ENST00000621445 119 ntBASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 AC073592.5-201ENST00000624854 528 ntBASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NPIPA1Q9UND3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 AL591424.1-201ENST00000442569 1213 ntBASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 KRT18P3-201ENST00000451602 1288 ntBASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 AD001527.2-201ENST00000622994 785 ntBASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA1Q9UND3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 AC009949.1-201ENST00000623048 1830 ntBASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms