Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 AC008735.5-201ENST00000623544 497 ntBASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 AC006504.4-201ENST00000592118 1568 ntBASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 AC106820.2-201ENST00000563775 3264 ntBASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 AC073621.1-201ENST00000392730 636 ntBASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 ELK2BP-201ENST00000415014 1224 ntBASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 AL031284.1-201ENST00000419297 478 ntBASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 RNA5SP419-201ENST00000515908 135 ntBASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 AC012640.2-201ENST00000561606 901 ntBASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 AC092053.1-201ENST00000605787 1936 ntBASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHA4Q9UN74 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 RPS2P28-201ENST00000314255 741 ntBASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHA4Q9UN74 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 AL662844.1-201ENST00000546340 181 ntBASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 AC105339.3-201ENST00000560043 636 ntBASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 AL049840.3-201ENST00000602669 611 ntBASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 MIR7706-201ENST00000613747 67 ntBASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PCDHA4Q9UN74 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms