Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 LINC00304-203ENST00000565008 1864 ntBASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 PCDHB17P-201ENST00000539533 2393 ntBASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.29
PCDHGB4Q9UN71 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
PCDHGB4Q9UN71 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 BX664615.1-201ENST00000443558 458 ntBASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 AC005363.2-201ENST00000618631 242 ntBASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 AC073912.3-201ENST00000624414 853 ntBASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB4Q9UN71 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 STARP1-201ENST00000397973 869 ntBASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 AC010203.1-204ENST00000548782 407 ntBASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGB4Q9UN71 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 AC068418.2-201ENST00000577309 3703 ntBASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 ZNF444P1-201ENST00000559497 298 ntBASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 AL441883.1-201ENST00000566170 1045 ntBASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PCDHGB4Q9UN71 AC004263.2-201ENST00000617183 678 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms