Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC00474Q9P2X8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00474Q9P2X8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
LINC00474Q9P2X8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.59
LINC00474Q9P2X8 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC11.33□□□□□ -0.59
LINC00474Q9P2X8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 HCG4P8-203ENST00000443049 980 ntBASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 AP000867.3-201ENST00000524675 377 ntBASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 TPSP2-201ENST00000561760 610 ntBASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 MIR3652-201ENST00000579335 131 ntBASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 AL138831.2-201ENST00000606564 490 ntBASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00474Q9P2X8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 KRT16P4-201ENST00000453883 522 ntBASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 AC002558.1-201ENST00000488906 803 ntBASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 AC074051.2-201ENST00000565115 352 ntBASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms