Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRMT13Q9NUP7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 HMGA1P7-201ENST00000406908 502 ntBASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 SPCS2P4-201ENST00000436160 681 ntBASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 RBPMS2P1-201ENST00000437762 623 ntBASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 AC244107.1-201ENST00000442033 332 ntBASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 AL512356.2-201ENST00000546955 174 ntBASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 AP001059.3-201ENST00000619053 235 ntBASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT13Q9NUP7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRMT13Q9NUP7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRMT13Q9NUP7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.83■□□□□ 0.61
TRMT13Q9NUP7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRMT13Q9NUP7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRMT13Q9NUP7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRMT13Q9NUP7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRMT13Q9NUP7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 AC236430.1-201ENST00000402231 743 ntBASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 KLF2P3-201ENST00000451977 1087 ntBASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 AC190387.1-201ENST00000551683 408 ntBASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRMT13Q9NUP7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 AKAP8P1-201ENST00000434743 1349 ntBASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 BASP1P1-201ENST00000430708 665 ntBASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 AF228730.6-201ENST00000641497 218 ntBASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 AC084121.3-201ENST00000641716 218 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms