Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 TTC32-201ENST00000333610 822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 LINC02199-201ENST00000506655 2702 ntBASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FOXD4L1Q9NU39 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FOXD4L1Q9NU39 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
FOXD4L1Q9NU39 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.89■□□□□ 0.94
FOXD4L1Q9NU39 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FOXD4L1Q9NU39 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.94
FOXD4L1Q9NU39 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.89■□□□□ 0.94
FOXD4L1Q9NU39 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 AC092171.3-201ENST00000610122 2651 ntBASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 CHAC2-201ENST00000295304 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 RNU6-751P-201ENST00000516382 101 ntBASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 AP003168.1-201ENST00000530091 307 ntBASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 AC009268.1-201ENST00000561352 1203 ntBASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
FOXD4L1Q9NU39 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 TPTE2P1-204ENST00000435256 593 ntBASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 AC128688.1-201ENST00000487626 519 ntBASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 AL138960.2-201ENST00000625145 535 ntBASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
FOXD4L1Q9NU39 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms