Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC52A3Q9NQ40 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC52A3Q9NQ40 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC52A3Q9NQ40 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC52A3Q9NQ40 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC52A3Q9NQ40 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.36■□□□□ 0.21
SLC52A3Q9NQ40 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.36■□□□□ 0.21
SLC52A3Q9NQ40 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 AL391256.1-201ENST00000443260 1855 ntBASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 AL592071.1-201ENST00000611956 408 ntBASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 AC133561.5-201ENST00000635547 218 ntBASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC52A3Q9NQ40 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 AC022188.1-201ENST00000620960 1664 ntBASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 AC005521.1-201ENST00000393351 872 ntBASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 STK19B-204ENST00000512515 211 ntBASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 AC124864.1-201ENST00000623408 392 ntBASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
SLC52A3Q9NQ40 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC52A3Q9NQ40 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.33■□□□□ 0.21
SLC52A3Q9NQ40 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.33■□□□□ 0.21
SLC52A3Q9NQ40 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC52A3Q9NQ40 ALOX12P2-203ENST00000570921 1945 ntBASIC16.33■□□□□ 0.21
SLC52A3Q9NQ40 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SLC52A3Q9NQ40 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms