Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 STK25P1-201ENST00000585406 838 ntBASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 AC092068.3-201ENST00000587894 2016 ntBASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NLRC4Q9NPP4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
NLRC4Q9NPP4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
NLRC4Q9NPP4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 PCDHA14-201ENST00000506751 2298 ntBASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 AC246785.2-201ENST00000432512 513 ntBASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLRC4Q9NPP4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 AL118508.1-201ENST00000613502 2345 ntBASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 AL353593.2-201ENST00000602529 1483 ntBASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NLRC4Q9NPP4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms