Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MKKSQ9NPJ1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MKKSQ9NPJ1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MKKSQ9NPJ1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
MKKSQ9NPJ1 AC046185.3-201ENST00000623228 1824 ntBASIC16.4■□□□□ 0.22
MKKSQ9NPJ1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MKKSQ9NPJ1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
MKKSQ9NPJ1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MKKSQ9NPJ1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
MKKSQ9NPJ1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 AC097637.2-201ENST00000624096 1997 ntBASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 KRT18P27-201ENST00000427733 1299 ntBASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MKKSQ9NPJ1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 AC133963.1-201ENST00000504166 1679 ntBASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 AC098831.1-202ENST00000438821 336 ntBASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 RPL13AP23-201ENST00000480739 586 ntBASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 AC136632.2-201ENST00000512891 861 ntBASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 IGHV3-22-201ENST00000520721 359 ntBASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 AL356488.2-201ENST00000602755 427 ntBASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 AL139424.1-201ENST00000607572 797 ntBASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
MKKSQ9NPJ1 CROCCP1-201ENST00000426910 5675 ntBASIC16.37■□□□□ 0.21
MKKSQ9NPJ1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MKKSQ9NPJ1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.37■□□□□ 0.21
MKKSQ9NPJ1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MKKSQ9NPJ1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms