Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
BRF2Q9HAW0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 AC011676.5-201ENST00000624864 2660 ntBASIC16.53■□□□□ 0.24
BRF2Q9HAW0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 AC105020.1-201ENST00000435356 2205 ntBASIC16.53■□□□□ 0.24
BRF2Q9HAW0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 AC148477.5-201ENST00000625164 1645 ntBASIC16.53■□□□□ 0.24
BRF2Q9HAW0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 NUS1P2-201ENST00000417358 873 ntBASIC16.53■□□□□ 0.24
BRF2Q9HAW0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.53■□□□□ 0.24
BRF2Q9HAW0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 MIR1224-201ENST00000408193 85 ntBASIC16.52■□□□□ 0.24
BRF2Q9HAW0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms