Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 AC096633.1-201ENST00000422446 749 ntBASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 AP003733.1-201ENST00000491725 852 ntBASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 ZNF444P1-201ENST00000559497 298 ntBASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 AC145285.6-201ENST00000604632 637 ntBASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 AC066615.1-201ENST00000640911 628 ntBASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 IGHGP-201ENST00000390555 1178 ntBASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 AL353692.3-201ENST00000407031 1396 ntBASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 HLA-F-220ENST00000434407 884 ntBASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 IGHV3-52-201ENST00000519770 353 ntBASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD4Q9H0A8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD4Q9H0A8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.29■□□□□ 0.04
COMMD4Q9H0A8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
COMMD4Q9H0A8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
COMMD4Q9H0A8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.29■□□□□ 0.04
COMMD4Q9H0A8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD4Q9H0A8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD4Q9H0A8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD4Q9H0A8 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
COMMD4Q9H0A8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
COMMD4Q9H0A8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms