Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 MIR663A-201ENST00000385250 93 ntBASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 MIR4758-201ENST00000577688 71 ntBASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 AC087623.3-201ENST00000607047 1098 ntBASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 AL031985.4-201ENST00000642138 673 ntBASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLIRPQ9GZT3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 AL009178.2-201ENST00000597278 2719 ntBASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 KRT16P1-201ENST00000399124 1418 ntBASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 AP000692.2-201ENST00000608391 879 ntBASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLIRPQ9GZT3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLIRPQ9GZT3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLIRPQ9GZT3 AC096733.2-201ENST00000609937 1394 ntBASIC15.21■□□□□ 0.02
SLIRPQ9GZT3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.21■□□□□ 0.02
SLIRPQ9GZT3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLIRPQ9GZT3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.21■□□□□ 0.02
SLIRPQ9GZT3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SLIRPQ9GZT3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLIRPQ9GZT3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
SLIRPQ9GZT3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLIRPQ9GZT3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SLIRPQ9GZT3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLIRPQ9GZT3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLIRPQ9GZT3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.2■□□□□ 0.02
SLIRPQ9GZT3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLIRPQ9GZT3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLIRPQ9GZT3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.2■□□□□ 0.02
SLIRPQ9GZT3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLIRPQ9GZT3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms