Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 AC005052.1-201ENST00000625181 2492 ntBASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 KRT16P1-201ENST00000399124 1418 ntBASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 AC024909.3-201ENST00000611513 2257 ntBASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 KSR1P1-201ENST00000446298 240 ntBASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 AC011506.1-201ENST00000474329 610 ntBASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 AL162430.1-201ENST00000480705 870 ntBASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 CR392000.1-201ENST00000624770 1228 ntBASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 AL136379.1-201ENST00000623471 2642 ntBASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SMIM3Q9BZL3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 LINC02012-201ENST00000608206 1725 ntBASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 AC069544.1-201ENST00000609399 999 ntBASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 AL031985.4-201ENST00000642138 673 ntBASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms