Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
COL12A1Q99715 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.93□□□□□ -0.02
COL12A1Q99715 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL12A1Q99715 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.93□□□□□ -0.02
COL12A1Q99715 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
COL12A1Q99715 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL12A1Q99715 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.93□□□□□ -0.02
COL12A1Q99715 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL12A1Q99715 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.93□□□□□ -0.02
COL12A1Q99715 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL12A1Q99715 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL12A1Q99715 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL12A1Q99715 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL12A1Q99715 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.93□□□□□ -0.02
COL12A1Q99715 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL12A1Q99715 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.93□□□□□ -0.02
COL12A1Q99715 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.93□□□□□ -0.02
COL12A1Q99715 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL12A1Q99715 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.93□□□□□ -0.02
COL12A1Q99715 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.93□□□□□ -0.02
COL12A1Q99715 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.93□□□□□ -0.02
COL12A1Q99715 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.93□□□□□ -0.02
COL12A1Q99715 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL12A1Q99715 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL12A1Q99715 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.93□□□□□ -0.02
COL12A1Q99715 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
COL12A1Q99715 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.92□□□□□ -0.02
COL12A1Q99715 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.92□□□□□ -0.02
COL12A1Q99715 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.92□□□□□ -0.02
COL12A1Q99715 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.92□□□□□ -0.02
COL12A1Q99715 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.92□□□□□ -0.02
COL12A1Q99715 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.92□□□□□ -0.02
COL12A1Q99715 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.92□□□□□ -0.02
COL12A1Q99715 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.92□□□□□ -0.02
COL12A1Q99715 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
COL12A1Q99715 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
COL12A1Q99715 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.92□□□□□ -0.02
COL12A1Q99715 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.92□□□□□ -0.02
COL12A1Q99715 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.92□□□□□ -0.02
COL12A1Q99715 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.92□□□□□ -0.02
COL12A1Q99715 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
COL12A1Q99715 TUBB1P2-201ENST00000422712 1306 ntBASIC14.92□□□□□ -0.02
COL12A1Q99715 TUBB1P1-201ENST00000503144 1300 ntBASIC14.92□□□□□ -0.02
COL12A1Q99715 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.92□□□□□ -0.02
COL12A1Q99715 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL12A1Q99715 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
COL12A1Q99715 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.91□□□□□ -0.02
COL12A1Q99715 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL12A1Q99715 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL12A1Q99715 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.91□□□□□ -0.02
COL12A1Q99715 AC234783.1-201ENST00000441761 496 ntBASIC14.91□□□□□ -0.02
COL12A1Q99715 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.91□□□□□ -0.02
COL12A1Q99715 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.91□□□□□ -0.02
COL12A1Q99715 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COL12A1Q99715 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.91□□□□□ -0.02
COL12A1Q99715 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL12A1Q99715 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL12A1Q99715 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL12A1Q99715 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL12A1Q99715 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COL12A1Q99715 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.91□□□□□ -0.02
COL12A1Q99715 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL12A1Q99715 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.91□□□□□ -0.02
COL12A1Q99715 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.91□□□□□ -0.02
COL12A1Q99715 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.91□□□□□ -0.02
COL12A1Q99715 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COL12A1Q99715 AC008738.7-201ENST00000609744 511 ntBASIC14.91□□□□□ -0.02
COL12A1Q99715 AL645728.2-201ENST00000641974 660 ntBASIC14.91□□□□□ -0.02
COL12A1Q99715 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL12A1Q99715 ANO7L1-203ENST00000602586 1720 ntBASIC14.91□□□□□ -0.02
COL12A1Q99715 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC14.91□□□□□ -0.02
COL12A1Q99715 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.91□□□□□ -0.02
COL12A1Q99715 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
COL12A1Q99715 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
COL12A1Q99715 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COL12A1Q99715 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL12A1Q99715 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
COL12A1Q99715 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL12A1Q99715 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COL12A1Q99715 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL12A1Q99715 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms