Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.84□□□□□ -0.51
LYSTQ99698 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.84□□□□□ -0.51
LYSTQ99698 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC11.84□□□□□ -0.51
LYSTQ99698 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LYSTQ99698 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LYSTQ99698 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
LYSTQ99698 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LYSTQ99698 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LYSTQ99698 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LYSTQ99698 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
LYSTQ99698 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LYSTQ99698 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
LYSTQ99698 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LYSTQ99698 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LYSTQ99698 AC005237.2-201ENST00000434368 219 ntBASIC11.84□□□□□ -0.51
LYSTQ99698 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.84□□□□□ -0.51
LYSTQ99698 RARRES2P8-201ENST00000566335 367 ntBASIC11.84□□□□□ -0.51
LYSTQ99698 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
LYSTQ99698 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LYSTQ99698 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LYSTQ99698 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.83□□□□□ -0.52
LYSTQ99698 FAM86C2P-203ENST00000528684 1004 ntBASIC11.83□□□□□ -0.52
LYSTQ99698 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LYSTQ99698 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.83□□□□□ -0.52
LYSTQ99698 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC11.83□□□□□ -0.52
LYSTQ99698 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LYSTQ99698 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.83□□□□□ -0.52
LYSTQ99698 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 STK19B-204ENST00000512515 211 ntBASIC11.83□□□□□ -0.52
LYSTQ99698 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.83□□□□□ -0.52
LYSTQ99698 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.83□□□□□ -0.52
LYSTQ99698 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.83□□□□□ -0.52
LYSTQ99698 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 STK4-201ENST00000372801 2038 ntTSL 2 BASIC11.83□□□□□ -0.52
LYSTQ99698 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC11.83□□□□□ -0.52
LYSTQ99698 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC11.83□□□□□ -0.52
LYSTQ99698 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC11.83□□□□□ -0.52
LYSTQ99698 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LYSTQ99698 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC11.83□□□□□ -0.52
LYSTQ99698 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 RBPMS2P1-201ENST00000437762 623 ntBASIC11.83□□□□□ -0.52
LYSTQ99698 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC11.83□□□□□ -0.52
LYSTQ99698 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LYSTQ99698 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
LYSTQ99698 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.83□□□□□ -0.52
LYSTQ99698 CDK4-206ENST00000549606 558 ntTSL 2 BASIC11.83□□□□□ -0.52
LYSTQ99698 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC11.83□□□□□ -0.52
LYSTQ99698 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.83□□□□□ -0.52
LYSTQ99698 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.83□□□□□ -0.52
LYSTQ99698 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LYSTQ99698 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LYSTQ99698 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LYSTQ99698 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LYSTQ99698 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LYSTQ99698 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.82□□□□□ -0.52
LYSTQ99698 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.82□□□□□ -0.52
LYSTQ99698 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC11.82□□□□□ -0.52
LYSTQ99698 AP000842.3-202ENST00000569238 1080 ntBASIC11.82□□□□□ -0.52
LYSTQ99698 MIR4538-201ENST00000581377 78 ntBASIC11.82□□□□□ -0.52
LYSTQ99698 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC11.82□□□□□ -0.52
LYSTQ99698 AL590787.1-201ENST00000568856 1315 ntBASIC11.82□□□□□ -0.52
LYSTQ99698 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
LYSTQ99698 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LYSTQ99698 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.82□□□□□ -0.52
LYSTQ99698 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LYSTQ99698 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LYSTQ99698 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LYSTQ99698 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
LYSTQ99698 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LYSTQ99698 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LYSTQ99698 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.82□□□□□ -0.52
LYSTQ99698 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LYSTQ99698 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
LYSTQ99698 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
LYSTQ99698 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.82□□□□□ -0.52
LYSTQ99698 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC11.82□□□□□ -0.52
LYSTQ99698 AC026150.2-201ENST00000564693 1156 ntBASIC11.82□□□□□ -0.52
LYSTQ99698 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.82□□□□□ -0.52
LYSTQ99698 MIR4259-201ENST00000584466 101 ntBASIC11.82□□□□□ -0.52
LYSTQ99698 AC004790.1-201ENST00000612686 536 ntBASIC11.82□□□□□ -0.52
LYSTQ99698 GGTLC5P-201ENST00000617623 998 ntBASIC11.82□□□□□ -0.52
LYSTQ99698 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.82□□□□□ -0.52
LYSTQ99698 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LYSTQ99698 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms