Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NLRP3Q96P20 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.23■□□□□ 0.99
NLRP3Q96P20 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
NLRP3Q96P20 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NLRP3Q96P20 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
NLRP3Q96P20 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.23■□□□□ 0.99
NLRP3Q96P20 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
NLRP3Q96P20 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.23■□□□□ 0.99
NLRP3Q96P20 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.23■□□□□ 0.99
NLRP3Q96P20 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.23■□□□□ 0.99
NLRP3Q96P20 AKAP8P1-201ENST00000434743 1349 ntBASIC21.23■□□□□ 0.99
NLRP3Q96P20 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NLRP3Q96P20 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
NLRP3Q96P20 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.23■□□□□ 0.99
NLRP3Q96P20 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NLRP3Q96P20 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
NLRP3Q96P20 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NLRP3Q96P20 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
NLRP3Q96P20 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.22■□□□□ 0.99
NLRP3Q96P20 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.22■□□□□ 0.99
NLRP3Q96P20 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 DUX4L17-201ENST00000557360 1267 ntBASIC21.22■□□□□ 0.99
NLRP3Q96P20 AL135744.1-201ENST00000565098 629 ntBASIC21.22■□□□□ 0.99
NLRP3Q96P20 AC005412.3-201ENST00000580309 715 ntBASIC21.22■□□□□ 0.99
NLRP3Q96P20 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.22■□□□□ 0.99
NLRP3Q96P20 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.22■□□□□ 0.99
NLRP3Q96P20 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.22■□□□□ 0.99
NLRP3Q96P20 AL161645.1-201ENST00000622716 1255 ntBASIC21.22■□□□□ 0.99
NLRP3Q96P20 BICD1-207ENST00000551848 1962 ntBASIC21.22■□□□□ 0.99
NLRP3Q96P20 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.22■□□□□ 0.99
NLRP3Q96P20 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.22■□□□□ 0.99
NLRP3Q96P20 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLRP3Q96P20 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.22■□□□□ 0.99
NLRP3Q96P20 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLRP3Q96P20 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLRP3Q96P20 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NLRP3Q96P20 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLRP3Q96P20 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NLRP3Q96P20 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 DUX4L27-201ENST00000554796 1261 ntBASIC21.21■□□□□ 0.99
NLRP3Q96P20 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLRP3Q96P20 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NLRP3Q96P20 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NLRP3Q96P20 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NLRP3Q96P20 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NLRP3Q96P20 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
NLRP3Q96P20 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLRP3Q96P20 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLRP3Q96P20 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.2■□□□□ 0.99
NLRP3Q96P20 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
NLRP3Q96P20 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
NLRP3Q96P20 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLRP3Q96P20 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NLRP3Q96P20 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLRP3Q96P20 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.2■□□□□ 0.98
NLRP3Q96P20 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.2■□□□□ 0.98
NLRP3Q96P20 KRT18P32-201ENST00000424695 1287 ntBASIC21.2■□□□□ 0.98
NLRP3Q96P20 FAM58DP-201ENST00000428076 619 ntBASIC21.2■□□□□ 0.98
NLRP3Q96P20 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.2■□□□□ 0.98
NLRP3Q96P20 COX20P2-201ENST00000452636 358 ntBASIC21.2■□□□□ 0.98
NLRP3Q96P20 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.2■□□□□ 0.98
NLRP3Q96P20 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.2■□□□□ 0.98
NLRP3Q96P20 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.2■□□□□ 0.98
NLRP3Q96P20 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NLRP3Q96P20 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NLRP3Q96P20 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms