Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALPK3Q96L96 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALPK3Q96L96 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALPK3Q96L96 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALPK3Q96L96 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 AC008735.3-201ENST00000596646 500 ntBASIC18.59■□□□□ 0.57
ALPK3Q96L96 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.58■□□□□ 0.57
ALPK3Q96L96 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
ALPK3Q96L96 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.58■□□□□ 0.57
ALPK3Q96L96 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALPK3Q96L96 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ALPK3Q96L96 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALPK3Q96L96 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALPK3Q96L96 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALPK3Q96L96 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ALPK3Q96L96 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ALPK3Q96L96 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALPK3Q96L96 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.58■□□□□ 0.56
ALPK3Q96L96 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.58■□□□□ 0.56
ALPK3Q96L96 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.56
ALPK3Q96L96 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALPK3Q96L96 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.58■□□□□ 0.56
ALPK3Q96L96 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ALPK3Q96L96 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALPK3Q96L96 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ALPK3Q96L96 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.58■□□□□ 0.56
ALPK3Q96L96 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.58■□□□□ 0.56
ALPK3Q96L96 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
ALPK3Q96L96 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.58■□□□□ 0.56
ALPK3Q96L96 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
ALPK3Q96L96 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.58■□□□□ 0.56
ALPK3Q96L96 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.57■□□□□ 0.56
ALPK3Q96L96 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALPK3Q96L96 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALPK3Q96L96 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.57■□□□□ 0.56
ALPK3Q96L96 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.57■□□□□ 0.56
ALPK3Q96L96 DFFBP1-201ENST00000433250 979 ntBASIC18.57■□□□□ 0.56
ALPK3Q96L96 AP005482.1-201ENST00000563722 1273 ntBASIC18.57■□□□□ 0.56
ALPK3Q96L96 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.57■□□□□ 0.56
ALPK3Q96L96 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.57■□□□□ 0.56
ALPK3Q96L96 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
ALPK3Q96L96 SLC22A20-204ENST00000530038 1673 ntBASIC18.57■□□□□ 0.56
ALPK3Q96L96 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALPK3Q96L96 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ALPK3Q96L96 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ALPK3Q96L96 AC022210.1-201ENST00000449856 793 ntBASIC18.57■□□□□ 0.56
ALPK3Q96L96 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.57■□□□□ 0.56
ALPK3Q96L96 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
ALPK3Q96L96 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.57■□□□□ 0.56
ALPK3Q96L96 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALPK3Q96L96 AL109936.8-201ENST00000641772 604 ntBASIC18.57■□□□□ 0.56
ALPK3Q96L96 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.57■□□□□ 0.56
ALPK3Q96L96 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.56■□□□□ 0.56
ALPK3Q96L96 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.56■□□□□ 0.56
ALPK3Q96L96 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALPK3Q96L96 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ALPK3Q96L96 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.56■□□□□ 0.56
ALPK3Q96L96 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.56■□□□□ 0.56
ALPK3Q96L96 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ALPK3Q96L96 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ALPK3Q96L96 AL031598.1-201ENST00000561511 1773 ntBASIC18.56■□□□□ 0.56
ALPK3Q96L96 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALPK3Q96L96 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ALPK3Q96L96 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.56■□□□□ 0.56
ALPK3Q96L96 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALPK3Q96L96 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.56■□□□□ 0.56
ALPK3Q96L96 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.56■□□□□ 0.56
ALPK3Q96L96 AC234783.1-201ENST00000441761 496 ntBASIC18.56■□□□□ 0.56
ALPK3Q96L96 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.56■□□□□ 0.56
ALPK3Q96L96 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
ALPK3Q96L96 AC068587.10-201ENST00000641210 219 ntBASIC18.56■□□□□ 0.56
ALPK3Q96L96 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALPK3Q96L96 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.56■□□□□ 0.56
ALPK3Q96L96 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALPK3Q96L96 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ALPK3Q96L96 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALPK3Q96L96 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.55■□□□□ 0.56
ALPK3Q96L96 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.55■□□□□ 0.56
ALPK3Q96L96 HLA-V-204ENST00000476601 1289 ntBASIC18.55■□□□□ 0.56
ALPK3Q96L96 ZNF890P-202ENST00000530367 1156 ntBASIC18.55■□□□□ 0.56
ALPK3Q96L96 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
ALPK3Q96L96 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALPK3Q96L96 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALPK3Q96L96 AC073592.3-201ENST00000625118 1834 ntBASIC18.55■□□□□ 0.56
ALPK3Q96L96 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALPK3Q96L96 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALPK3Q96L96 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.55■□□□□ 0.56
ALPK3Q96L96 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ALPK3Q96L96 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.55■□□□□ 0.56
ALPK3Q96L96 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALPK3Q96L96 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.55■□□□□ 0.56
ALPK3Q96L96 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALPK3Q96L96 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ALPK3Q96L96 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms