Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 TFAMP1-201ENST00000412727 736 ntBASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 KRT18P32-201ENST00000424695 1287 ntBASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 AC005034.1-201ENST00000426657 489 ntBASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 RN7SL589P-201ENST00000481268 310 ntBASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 AC051619.7-201ENST00000568314 623 ntBASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRNP40Q96DI7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 WIZP1-201ENST00000531444 2299 ntBASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 TUBB3P1-201ENST00000405796 1332 ntBASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 AC020763.4-201ENST00000623414 4170 ntBASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 MIR943-201ENST00000401286 94 ntBASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 FAM58DP-201ENST00000428076 619 ntBASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 AL512356.2-201ENST00000546955 174 ntBASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 AC243562.1-201ENST00000560672 389 ntBASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 AL035252.4-201ENST00000624174 288 ntBASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRNP40Q96DI7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SNRNP40Q96DI7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNRNP40Q96DI7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
SNRNP40Q96DI7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.46■□□□□ 0.07
SNRNP40Q96DI7 AC063926.2-201ENST00000623766 1308 ntBASIC15.46■□□□□ 0.07
SNRNP40Q96DI7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.46■□□□□ 0.07
SNRNP40Q96DI7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SNRNP40Q96DI7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.46■□□□□ 0.07
SNRNP40Q96DI7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms