Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.67■□□□□ 0.26
VPS33AQ96AX1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 STARP1-201ENST00000397973 869 ntBASIC16.66■□□□□ 0.26
VPS33AQ96AX1 AC087499.1-201ENST00000418141 1075 ntBASIC16.66■□□□□ 0.26
VPS33AQ96AX1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 ZNF444P1-201ENST00000559497 298 ntBASIC16.66■□□□□ 0.26
VPS33AQ96AX1 AC011558.1-201ENST00000623459 338 ntBASIC16.66■□□□□ 0.26
VPS33AQ96AX1 AL031432.5-201ENST00000641059 760 ntBASIC16.66■□□□□ 0.26
VPS33AQ96AX1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS33AQ96AX1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 AL162727.3-201ENST00000635661 2787 ntBASIC16.65■□□□□ 0.26
VPS33AQ96AX1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 AC002558.1-201ENST00000488906 803 ntBASIC16.65■□□□□ 0.26
VPS33AQ96AX1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 AC092068.3-201ENST00000587894 2016 ntBASIC16.65■□□□□ 0.26
VPS33AQ96AX1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS33AQ96AX1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VPS33AQ96AX1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.64■□□□□ 0.26
VPS33AQ96AX1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.64■□□□□ 0.26
VPS33AQ96AX1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 DOC2GP-204ENST00000639052 2548 ntBASIC16.64■□□□□ 0.25
VPS33AQ96AX1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 AC008741.2-201ENST00000612792 3115 ntBASIC16.64■□□□□ 0.25
VPS33AQ96AX1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS33AQ96AX1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms