Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 SIRPAP1-201ENST00000448467 1770 ntBASIC18.25■□□□□ 0.51
ATP2A3Q93084 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 MED15P5-201ENST00000423150 992 ntBASIC18.25■□□□□ 0.51
ATP2A3Q93084 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 BX005266.1-201ENST00000473402 457 ntBASIC18.25■□□□□ 0.51
ATP2A3Q93084 RNA5SP415-201ENST00000517246 115 ntBASIC18.25■□□□□ 0.51
ATP2A3Q93084 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A3Q93084 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.25■□□□□ 0.51
ATP2A3Q93084 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ATP2A3Q93084 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ATP2A3Q93084 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP2A3Q93084 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATP2A3Q93084 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP2A3Q93084 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ATP2A3Q93084 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 MIR1233-2-201ENST00000408138 82 ntBASIC18.24■□□□□ 0.51
ATP2A3Q93084 MIR1233-1-201ENST00000408722 82 ntBASIC18.24■□□□□ 0.51
ATP2A3Q93084 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.24■□□□□ 0.51
ATP2A3Q93084 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.24■□□□□ 0.51
ATP2A3Q93084 AC034105.1-201ENST00000563488 319 ntBASIC18.24■□□□□ 0.51
ATP2A3Q93084 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP2A3Q93084 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP2A3Q93084 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ATP2A3Q93084 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A3Q93084 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.24■□□□□ 0.51
ATP2A3Q93084 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A3Q93084 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A3Q93084 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A3Q93084 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A3Q93084 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A3Q93084 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A3Q93084 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A3Q93084 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A3Q93084 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A3Q93084 COX5BP2-201ENST00000392354 334 ntBASIC18.23■□□□□ 0.51
ATP2A3Q93084 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.23■□□□□ 0.51
ATP2A3Q93084 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP2A3Q93084 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP2A3Q93084 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
ATP2A3Q93084 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A3Q93084 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP2A3Q93084 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.23■□□□□ 0.51
ATP2A3Q93084 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP2A3Q93084 AC140113.2-201ENST00000604370 208 ntBASIC18.23■□□□□ 0.51
ATP2A3Q93084 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.23■□□□□ 0.51
ATP2A3Q93084 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ATP2A3Q93084 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms