Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PTCD2Q8WV60 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCD2Q8WV60 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.53■□□□□ 0.4
PTCD2Q8WV60 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 LINC02012-201ENST00000608206 1725 ntBASIC17.53■□□□□ 0.4
PTCD2Q8WV60 AC093525.9-201ENST00000624961 1746 ntBASIC17.53■□□□□ 0.4
PTCD2Q8WV60 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 SLC25A1P3-201ENST00000395415 828 ntBASIC17.53■□□□□ 0.4
PTCD2Q8WV60 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 SLC25A6P4-201ENST00000586535 553 ntBASIC17.53■□□□□ 0.4
PTCD2Q8WV60 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 AC080080.1-201ENST00000625121 2420 ntBASIC17.53■□□□□ 0.4
PTCD2Q8WV60 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCD2Q8WV60 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 AC003669.1-201ENST00000334569 611 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms