Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 UQCC1-201ENST00000349714 2188 ntTSL 5 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 WDR76-202ENST00000381246 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 ELF5-205ENST00000532417 2330 ntTSL 2 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 TMPRSS7-205ENST00000617607 2377 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 AP003969.2-201ENST00000623739 2275 ntBASIC10.71□□□□□ -0.69
SVIPQ8NHG7 AC022107.1-201ENST00000624833 3094 ntBASIC10.71□□□□□ -0.69
SVIPQ8NHG7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC10.71□□□□□ -0.69
SVIPQ8NHG7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
SVIPQ8NHG7 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SVIPQ8NHG7 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SVIPQ8NHG7 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SVIPQ8NHG7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC10.71□□□□□ -0.7
SVIPQ8NHG7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SVIPQ8NHG7 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC10.71□□□□□ -0.7
SVIPQ8NHG7 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC10.71□□□□□ -0.7
SVIPQ8NHG7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SVIPQ8NHG7 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
SVIPQ8NHG7 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
SVIPQ8NHG7 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.71□□□□□ -0.7
SVIPQ8NHG7 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 TP53-208ENST00000504290 2331 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 TP53-220ENST00000610623 2331 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 MEX3B-202ENST00000558133 4333 ntBASIC10.7□□□□□ -0.7
SVIPQ8NHG7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 STAT5A-209ENST00000588868 3629 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 AC026746.1-203ENST00000513386 1676 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 MEF2D-202ENST00000360595 3194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 PRLR-211ENST00000511486 1566 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 PCYOX1L-207ENST00000514349 2793 ntTSL 2 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 SPDYE5-202ENST00000624640 2667 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 CSRNP1-202ENST00000514182 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 CTBP2P1-201ENST00000431853 245 ntBASIC10.7□□□□□ -0.7
SVIPQ8NHG7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms