Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.21■□□□□ 0.19
NUP43Q8NFH3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.21■□□□□ 0.19
NUP43Q8NFH3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NUP43Q8NFH3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NUP43Q8NFH3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NUP43Q8NFH3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.21■□□□□ 0.19
NUP43Q8NFH3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NUP43Q8NFH3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NUP43Q8NFH3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NUP43Q8NFH3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NUP43Q8NFH3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
NUP43Q8NFH3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NUP43Q8NFH3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NUP43Q8NFH3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NUP43Q8NFH3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NUP43Q8NFH3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NUP43Q8NFH3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.18
NUP43Q8NFH3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
NUP43Q8NFH3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NUP43Q8NFH3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NUP43Q8NFH3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
NUP43Q8NFH3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
NUP43Q8NFH3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 AC060834.1-201ENST00000443027 2032 ntBASIC16.2■□□□□ 0.18
NUP43Q8NFH3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 KRT16P4-201ENST00000453883 522 ntBASIC16.2■□□□□ 0.18
NUP43Q8NFH3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NUP43Q8NFH3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 AC009053.2-201ENST00000563701 2365 ntBASIC16.19■□□□□ 0.18
NUP43Q8NFH3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 AL020989.1-201ENST00000422979 469 ntBASIC16.19■□□□□ 0.18
NUP43Q8NFH3 ABCD1P5-201ENST00000445663 754 ntBASIC16.19■□□□□ 0.18
NUP43Q8NFH3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
NUP43Q8NFH3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms