Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 AC060834.1-201ENST00000443027 2032 ntBASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 KRT18P27-201ENST00000427733 1299 ntBASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 AC139887.3-201ENST00000568585 713 ntBASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 AL589182.2-201ENST00000619332 1049 ntBASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 NCF1C-201ENST00000438382 1427 ntBASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZSWIM2Q8NEG5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 AL139424.1-201ENST00000607572 797 ntBASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZSWIM2Q8NEG5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 LAGE3P1-201ENST00000425356 484 ntBASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 AC008735.5-201ENST00000623544 497 ntBASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ZSWIM2Q8NEG5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ZSWIM2Q8NEG5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms