Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ACTG1P4-201ENST00000425123 1122 ntBASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 SAPCD2P3-201ENST00000455031 850 ntBASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 SCARNA2-201ENST00000458748 420 ntBASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 MTDHP3-201ENST00000594186 672 ntBASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 REXO1L6P-202ENST00000619970 1078 ntBASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 AL355877.3-201ENST00000622820 899 ntBASIC16.52■□□□□ 0.24
SRFBP1Q8NEF9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRFBP1Q8NEF9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SRFBP1Q8NEF9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRFBP1Q8NEF9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SRFBP1Q8NEF9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRFBP1Q8NEF9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRFBP1Q8NEF9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRFBP1Q8NEF9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 AC093525.9-201ENST00000624961 1746 ntBASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 AL356309.3-201ENST00000624132 1934 ntBASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 CROCCP1-201ENST00000426910 5675 ntBASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 AL645608.8-201ENST00000606034 2086 ntBASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 AL022326.1-202ENST00000641533 845 ntBASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.51■□□□□ 0.23
SRFBP1Q8NEF9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 AC008608.2-201ENST00000606089 416 ntBASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRFBP1Q8NEF9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRFBP1Q8NEF9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms