Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 SIGLEC30P-201ENST00000455569 941 ntBASIC16.72■□□□□ 0.27
KRT78Q8N1N4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 LINC01711-201ENST00000598340 967 ntBASIC16.72■□□□□ 0.27
KRT78Q8N1N4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.72■□□□□ 0.27
KRT78Q8N1N4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 AC116353.5-201ENST00000638148 1699 ntBASIC16.72■□□□□ 0.27
KRT78Q8N1N4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 AC132008.2-207ENST00000454517 770 ntBASIC16.71■□□□□ 0.27
KRT78Q8N1N4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT78Q8N1N4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
KRT78Q8N1N4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 SPDYE21P-201ENST00000413323 827 ntBASIC16.7■□□□□ 0.26
KRT78Q8N1N4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 KRT18P31-201ENST00000506277 1292 ntBASIC16.7■□□□□ 0.26
KRT78Q8N1N4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 AC091304.2-201ENST00000564639 760 ntBASIC16.7■□□□□ 0.26
KRT78Q8N1N4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 AC093525.9-201ENST00000624961 1746 ntBASIC16.7■□□□□ 0.26
KRT78Q8N1N4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT78Q8N1N4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms