Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 FZD10-202ENST00000539839 3282 ntBASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 AC064836.3-201ENST00000607928 673 ntBASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 PI4KAP1-204ENST00000612579 1703 ntBASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 AL590787.1-201ENST00000568856 1315 ntBASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN4BQ8IWT1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 AP002414.1-201ENST00000391405 1147 ntBASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 KRT18P13-201ENST00000400056 1290 ntBASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 PGAM5P1-201ENST00000518923 814 ntBASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCN4BQ8IWT1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms