Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 LAGE3P1-201ENST00000425356 484 ntBASIC16.57■□□□□ 0.24
RAB43Q86YS6 AC092910.1-201ENST00000482027 1129 ntBASIC16.57■□□□□ 0.24
RAB43Q86YS6 POLD2P1-201ENST00000511220 997 ntBASIC16.57■□□□□ 0.24
RAB43Q86YS6 DUTP2-201ENST00000519164 463 ntBASIC16.57■□□□□ 0.24
RAB43Q86YS6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RAB43Q86YS6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RAB43Q86YS6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 AC046158.3-201ENST00000624947 2558 ntBASIC16.57■□□□□ 0.24
RAB43Q86YS6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB43Q86YS6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB43Q86YS6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB43Q86YS6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB43Q86YS6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB43Q86YS6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB43Q86YS6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 AC080080.1-201ENST00000625121 2420 ntBASIC16.56■□□□□ 0.24
RAB43Q86YS6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB43Q86YS6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB43Q86YS6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 MIR940-201ENST00000401276 94 ntBASIC16.56■□□□□ 0.24
RAB43Q86YS6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 AC105339.3-201ENST00000560043 636 ntBASIC16.56■□□□□ 0.24
RAB43Q86YS6 AC145285.3-201ENST00000564603 959 ntBASIC16.56■□□□□ 0.24
RAB43Q86YS6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 AL022326.1-202ENST00000641533 845 ntBASIC16.56■□□□□ 0.24
RAB43Q86YS6 AC107918.4-202ENST00000641623 219 ntBASIC16.56■□□□□ 0.24
RAB43Q86YS6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB43Q86YS6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB43Q86YS6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB43Q86YS6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB43Q86YS6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB43Q86YS6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB43Q86YS6 PHGDH-209ENST00000641074 1780 ntBASIC16.56■□□□□ 0.24
RAB43Q86YS6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB43Q86YS6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB43Q86YS6 AC079776.2-201ENST00000641154 1609 ntBASIC16.56■□□□□ 0.24
RAB43Q86YS6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 AC098831.1-202ENST00000438821 336 ntBASIC16.55■□□□□ 0.24
RAB43Q86YS6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 AC092865.5-201ENST00000545435 363 ntBASIC16.55■□□□□ 0.24
RAB43Q86YS6 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RAB43Q86YS6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB43Q86YS6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms