Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LDB1Q86U70 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.28■□□□□ 0.36
LDB1Q86U70 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LDB1Q86U70 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LDB1Q86U70 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.28■□□□□ 0.36
LDB1Q86U70 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.28■□□□□ 0.36
LDB1Q86U70 AC011676.5-201ENST00000624864 2660 ntBASIC17.28■□□□□ 0.36
LDB1Q86U70 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LDB1Q86U70 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LDB1Q86U70 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LDB1Q86U70 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LDB1Q86U70 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LDB1Q86U70 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LDB1Q86U70 AC003669.1-201ENST00000334569 611 ntBASIC17.28■□□□□ 0.36
LDB1Q86U70 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.28■□□□□ 0.36
LDB1Q86U70 AC132008.2-207ENST00000454517 770 ntBASIC17.28■□□□□ 0.36
LDB1Q86U70 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.28■□□□□ 0.36
LDB1Q86U70 MIR3652-201ENST00000579335 131 ntBASIC17.28■□□□□ 0.36
LDB1Q86U70 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.28■□□□□ 0.36
LDB1Q86U70 AC004817.3-201ENST00000602957 2129 ntBASIC17.28■□□□□ 0.36
LDB1Q86U70 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LDB1Q86U70 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.28■□□□□ 0.36
LDB1Q86U70 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LDB1Q86U70 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LDB1Q86U70 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LDB1Q86U70 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
LDB1Q86U70 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.28■□□□□ 0.36
LDB1Q86U70 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LDB1Q86U70 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.28■□□□□ 0.36
LDB1Q86U70 NKILA-202ENST00000614771 2598 ntBASIC17.28■□□□□ 0.36
LDB1Q86U70 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LDB1Q86U70 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LDB1Q86U70 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LDB1Q86U70 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LDB1Q86U70 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.27■□□□□ 0.36
LDB1Q86U70 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LDB1Q86U70 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LDB1Q86U70 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LDB1Q86U70 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.27■□□□□ 0.36
LDB1Q86U70 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LDB1Q86U70 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LDB1Q86U70 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LDB1Q86U70 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
LDB1Q86U70 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LDB1Q86U70 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LDB1Q86U70 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LDB1Q86U70 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.27■□□□□ 0.36
LDB1Q86U70 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LDB1Q86U70 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.27■□□□□ 0.36
LDB1Q86U70 AP001269.4-201ENST00000609611 512 ntBASIC17.27■□□□□ 0.36
LDB1Q86U70 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.27■□□□□ 0.36
LDB1Q86U70 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LDB1Q86U70 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LDB1Q86U70 AC012313.10-201ENST00000623509 926 ntBASIC17.27■□□□□ 0.36
LDB1Q86U70 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.27■□□□□ 0.36
LDB1Q86U70 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LDB1Q86U70 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LDB1Q86U70 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.35
LDB1Q86U70 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LDB1Q86U70 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
LDB1Q86U70 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LDB1Q86U70 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.27■□□□□ 0.35
LDB1Q86U70 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LDB1Q86U70 LINC02012-201ENST00000608206 1725 ntBASIC17.27■□□□□ 0.35
LDB1Q86U70 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LDB1Q86U70 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LDB1Q86U70 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB1Q86U70 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.26■□□□□ 0.35
LDB1Q86U70 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB1Q86U70 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB1Q86U70 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LDB1Q86U70 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB1Q86U70 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.26■□□□□ 0.35
LDB1Q86U70 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LDB1Q86U70 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB1Q86U70 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB1Q86U70 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LDB1Q86U70 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.26■□□□□ 0.35
LDB1Q86U70 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.26■□□□□ 0.35
LDB1Q86U70 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.26■□□□□ 0.35
LDB1Q86U70 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.26■□□□□ 0.35
LDB1Q86U70 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LDB1Q86U70 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.26■□□□□ 0.35
LDB1Q86U70 ABCD1P5-201ENST00000445663 754 ntBASIC17.26■□□□□ 0.35
LDB1Q86U70 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.26■□□□□ 0.35
LDB1Q86U70 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.26■□□□□ 0.35
LDB1Q86U70 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LDB1Q86U70 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.26■□□□□ 0.35
LDB1Q86U70 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LDB1Q86U70 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB1Q86U70 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LDB1Q86U70 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.26■□□□□ 0.35
LDB1Q86U70 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LDB1Q86U70 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LDB1Q86U70 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms