Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 TNRC18P3-201ENST00000441896 2691 ntBASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 TBC1D3P5-201ENST00000579401 1545 ntBASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
MRPL55Q7Z7F7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 AP001094.4-201ENST00000579008 2176 ntBASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 AC016396.2-201ENST00000562575 1417 ntBASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
MRPL55Q7Z7F7 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 Z83836.1-201ENST00000624605 1642 ntBASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 AC005104.2-201ENST00000427818 678 ntBASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 AC068472.1-201ENST00000474589 881 ntBASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 AL390719.2-201ENST00000606993 987 ntBASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms