Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 AKR1C7P-201ENST00000305623 895 ntBASIC11.51□□□□□ -0.57
SCXQ7RTU7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 SAPCD2P3-201ENST00000455031 850 ntBASIC11.51□□□□□ -0.57
SCXQ7RTU7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 AC096582.2-201ENST00000510860 516 ntBASIC11.51□□□□□ -0.57
SCXQ7RTU7 AC079776.4-201ENST00000511039 504 ntBASIC11.51□□□□□ -0.57
SCXQ7RTU7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 GXYLT1P4-201ENST00000613576 1192 ntBASIC11.51□□□□□ -0.57
SCXQ7RTU7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SCXQ7RTU7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCXQ7RTU7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 MYLKP1-201ENST00000509077 1580 ntBASIC11.5□□□□□ -0.57
SCXQ7RTU7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 AC141586.5-201ENST00000624546 2050 ntBASIC11.5□□□□□ -0.57
SCXQ7RTU7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 SIRPAP1-201ENST00000448467 1770 ntBASIC11.5□□□□□ -0.57
SCXQ7RTU7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 TSPY12P-201ENST00000421279 868 ntBASIC11.5□□□□□ -0.57
SCXQ7RTU7 AP000347.1-202ENST00000435868 847 ntBASIC11.5□□□□□ -0.57
SCXQ7RTU7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 AC113404.2-201ENST00000507884 177 ntBASIC11.5□□□□□ -0.57
SCXQ7RTU7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 AL662844.1-201ENST00000546340 181 ntBASIC11.5□□□□□ -0.57
SCXQ7RTU7 SLC25A6P4-201ENST00000586535 553 ntBASIC11.5□□□□□ -0.57
SCXQ7RTU7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 REXO1L6P-202ENST00000619970 1078 ntBASIC11.5□□□□□ -0.57
SCXQ7RTU7 ANKRD20A8P-203ENST00000641373 517 ntBASIC11.5□□□□□ -0.57
SCXQ7RTU7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms