Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
USP50Q70EL3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP50Q70EL3 AC008738.7-201ENST00000609744 511 ntBASIC20.16■□□□□ 0.82
USP50Q70EL3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.16■□□□□ 0.82
USP50Q70EL3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.16■□□□□ 0.82
USP50Q70EL3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP50Q70EL3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP50Q70EL3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.16■□□□□ 0.82
USP50Q70EL3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
USP50Q70EL3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
USP50Q70EL3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.15■□□□□ 0.82
USP50Q70EL3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
USP50Q70EL3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
USP50Q70EL3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.15■□□□□ 0.82
USP50Q70EL3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.15■□□□□ 0.82
USP50Q70EL3 MIR1909-201ENST00000411312 80 ntBASIC20.15■□□□□ 0.82
USP50Q70EL3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
USP50Q70EL3 INE1-201ENST00000456273 945 ntBASIC20.15■□□□□ 0.82
USP50Q70EL3 ACA64.2-201ENST00000459014 129 ntBASIC20.15■□□□□ 0.82
USP50Q70EL3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.15■□□□□ 0.82
USP50Q70EL3 AC105233.2-201ENST00000523697 349 ntBASIC20.15■□□□□ 0.82
USP50Q70EL3 AF228730.5-201ENST00000530288 346 ntBASIC20.15■□□□□ 0.82
USP50Q70EL3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.15■□□□□ 0.82
USP50Q70EL3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.15■□□□□ 0.82
USP50Q70EL3 MIR6805-201ENST00000615055 62 ntBASIC20.15■□□□□ 0.82
USP50Q70EL3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.15■□□□□ 0.82
USP50Q70EL3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP50Q70EL3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP50Q70EL3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP50Q70EL3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.14■□□□□ 0.81
USP50Q70EL3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.14■□□□□ 0.81
USP50Q70EL3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP50Q70EL3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP50Q70EL3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP50Q70EL3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.14■□□□□ 0.81
USP50Q70EL3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.14■□□□□ 0.81
USP50Q70EL3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.14■□□□□ 0.81
USP50Q70EL3 AL035456.1-201ENST00000456064 1369 ntBASIC20.14■□□□□ 0.81
USP50Q70EL3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
USP50Q70EL3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP50Q70EL3 AC079776.1-201ENST00000401540 1152 ntBASIC20.14■□□□□ 0.81
USP50Q70EL3 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.14■□□□□ 0.81
USP50Q70EL3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.14■□□□□ 0.81
USP50Q70EL3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
USP50Q70EL3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
USP50Q70EL3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP50Q70EL3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP50Q70EL3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.14■□□□□ 0.81
USP50Q70EL3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
USP50Q70EL3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP50Q70EL3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
USP50Q70EL3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.14■□□□□ 0.81
USP50Q70EL3 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.14■□□□□ 0.81
USP50Q70EL3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.14■□□□□ 0.81
USP50Q70EL3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.14■□□□□ 0.81
USP50Q70EL3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP50Q70EL3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
USP50Q70EL3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.14■□□□□ 0.81
USP50Q70EL3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP50Q70EL3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
USP50Q70EL3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP50Q70EL3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP50Q70EL3 CROCCP3-202ENST00000420820 1947 ntBASIC20.14■□□□□ 0.81
USP50Q70EL3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.13■□□□□ 0.81
USP50Q70EL3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP50Q70EL3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.13■□□□□ 0.81
USP50Q70EL3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP50Q70EL3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP50Q70EL3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.13■□□□□ 0.81
USP50Q70EL3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP50Q70EL3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP50Q70EL3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP50Q70EL3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
USP50Q70EL3 DGCR5-201ENST00000399539 862 ntBASIC20.13■□□□□ 0.81
USP50Q70EL3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP50Q70EL3 AL512384.1-201ENST00000406683 331 ntBASIC20.13■□□□□ 0.81
USP50Q70EL3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.13■□□□□ 0.81
USP50Q70EL3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
USP50Q70EL3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.13■□□□□ 0.81
USP50Q70EL3 AC104794.3-201ENST00000566840 1248 ntBASIC20.13■□□□□ 0.81
USP50Q70EL3 AC106886.1-201ENST00000568660 600 ntBASIC20.13■□□□□ 0.81
USP50Q70EL3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
USP50Q70EL3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP50Q70EL3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP50Q70EL3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms