Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.32■□□□□ 0.36
GDPD4Q6W3E5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.32■□□□□ 0.36
GDPD4Q6W3E5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
GDPD4Q6W3E5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
GDPD4Q6W3E5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GDPD4Q6W3E5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDPD4Q6W3E5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDPD4Q6W3E5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GDPD4Q6W3E5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 PRSS29P-201ENST00000440800 595 ntBASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 KRT18P3-201ENST00000451602 1288 ntBASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GDPD4Q6W3E5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 PMS2P7-201ENST00000506558 1336 ntBASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 VN2R19P-201ENST00000442399 1052 ntBASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 RNA5SP416-201ENST00000516838 111 ntBASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 AC093525.9-201ENST00000624961 1746 ntBASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDPD4Q6W3E5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDPD4Q6W3E5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.29■□□□□ 0.36
GDPD4Q6W3E5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
GDPD4Q6W3E5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDPD4Q6W3E5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GDPD4Q6W3E5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
GDPD4Q6W3E5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GDPD4Q6W3E5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GDPD4Q6W3E5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.29■□□□□ 0.36
GDPD4Q6W3E5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GDPD4Q6W3E5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDPD4Q6W3E5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDPD4Q6W3E5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDPD4Q6W3E5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms