Protein–RNA interactions for Protein: Q6UXM1

LRIG3, Leucine-rich repeats and immunoglobulin-like domains protein 3, humanhuman

Predictions only

Length 1,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3Q6UXM1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRIG3Q6UXM1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRIG3Q6UXM1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 REXO1L10P-201ENST00000615707 1290 ntBASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 REXO1L12P-201ENST00000622156 912 ntBASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 AC113410.3-201ENST00000623366 203 ntBASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 TMEM191A-211ENST00000637163 1067 ntBASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 AL049637.2-201ENST00000641778 930 ntBASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 PAUPAR-201ENST00000630360 2965 ntBASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRIG3Q6UXM1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 AC005052.1-201ENST00000625181 2492 ntBASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 MYCLP1-201ENST00000372451 1075 ntBASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 AP002490.2-201ENST00000524791 560 ntBASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIG3Q6UXM1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 AC096633.1-201ENST00000422446 749 ntBASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 AC007663.1-201ENST00000438948 1240 ntBASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.61■□□□□ 0.41
LRIG3Q6UXM1 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms