Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 AC087388.1-201ENST00000571370 1112 ntBASIC15.16■□□□□ 0.02
C11orf88Q6PI97 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 AL353719.1-201ENST00000566847 864 ntBASIC15.15■□□□□ 0.02
C11orf88Q6PI97 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C11orf88Q6PI97 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
C11orf88Q6PI97 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 SBF1P1-201ENST00000444527 5631 ntBASIC15.14■□□□□ 0.01
C11orf88Q6PI97 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 PCDHA1-201ENST00000378133 2726 ntBASIC15.14■□□□□ 0.01
C11orf88Q6PI97 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 RNF152P1-201ENST00000397754 604 ntBASIC15.14■□□□□ 0.01
C11orf88Q6PI97 AC104076.2-201ENST00000448912 469 ntBASIC15.14■□□□□ 0.01
C11orf88Q6PI97 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms