Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTR9Q6PD62 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTR9Q6PD62 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTR9Q6PD62 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTR9Q6PD62 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.5■□□□□ 0.87
CTR9Q6PD62 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTR9Q6PD62 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTR9Q6PD62 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
CTR9Q6PD62 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTR9Q6PD62 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTR9Q6PD62 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CTR9Q6PD62 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTR9Q6PD62 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTR9Q6PD62 PCDHB18P-201ENST00000524813 2368 ntBASIC20.5■□□□□ 0.87
CTR9Q6PD62 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CTR9Q6PD62 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTR9Q6PD62 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTR9Q6PD62 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.5■□□□□ 0.87
CTR9Q6PD62 AL591424.1-201ENST00000442569 1213 ntBASIC20.5■□□□□ 0.87
CTR9Q6PD62 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.5■□□□□ 0.87
CTR9Q6PD62 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTR9Q6PD62 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTR9Q6PD62 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.5■□□□□ 0.87
CTR9Q6PD62 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTR9Q6PD62 PMS2P7-201ENST00000506558 1336 ntBASIC20.5■□□□□ 0.87
CTR9Q6PD62 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTR9Q6PD62 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTR9Q6PD62 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTR9Q6PD62 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTR9Q6PD62 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTR9Q6PD62 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTR9Q6PD62 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTR9Q6PD62 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTR9Q6PD62 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 KRT18P2-201ENST00000447938 1258 ntBASIC20.49■□□□□ 0.87
CTR9Q6PD62 KRT18P3-201ENST00000451602 1288 ntBASIC20.49■□□□□ 0.87
CTR9Q6PD62 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTR9Q6PD62 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTR9Q6PD62 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTR9Q6PD62 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTR9Q6PD62 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTR9Q6PD62 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTR9Q6PD62 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTR9Q6PD62 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTR9Q6PD62 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTR9Q6PD62 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CTR9Q6PD62 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 AL138688.1-201ENST00000624851 1594 ntBASIC20.48■□□□□ 0.87
CTR9Q6PD62 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 OR7E47P-204ENST00000575924 449 ntBASIC20.48■□□□□ 0.87
CTR9Q6PD62 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 AC064836.3-201ENST00000607928 673 ntBASIC20.48■□□□□ 0.87
CTR9Q6PD62 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CTR9Q6PD62 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms