Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 AL024508.2-201ENST00000607749 1894 ntBASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 KRT18P48-201ENST00000434763 852 ntBASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 AL671277.2-201ENST00000458060 996 ntBASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 AC092597.1-201ENST00000487352 616 ntBASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 ZNF444P1-201ENST00000559497 298 ntBASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 AC079602.3-201ENST00000623931 403 ntBASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 AL590326.2-201ENST00000625139 305 ntBASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 AL023806.1-201ENST00000603994 1649 ntBASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 AC026691.1-201ENST00000602502 2017 ntBASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM53Q6P2H8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 LINC00602-201ENST00000629776 2065 ntBASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 AC024909.3-201ENST00000611513 2257 ntBASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 HLA-F-220ENST00000434407 884 ntBASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM53Q6P2H8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms