Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 ZNRF2P3-201ENST00000424200 374 ntBASIC13.11□□□□□ -0.31
MRPL54Q6P161 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.11□□□□□ -0.31
MRPL54Q6P161 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.11□□□□□ -0.31
MRPL54Q6P161 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
MRPL54Q6P161 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
MRPL54Q6P161 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
MRPL54Q6P161 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.11□□□□□ -0.31
MRPL54Q6P161 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
MRPL54Q6P161 AC092053.1-201ENST00000605787 1936 ntBASIC13.11□□□□□ -0.31
MRPL54Q6P161 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
MRPL54Q6P161 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.1□□□□□ -0.31
MRPL54Q6P161 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
MRPL54Q6P161 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
MRPL54Q6P161 LINC02012-201ENST00000608206 1725 ntBASIC13.1□□□□□ -0.31
MRPL54Q6P161 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.1□□□□□ -0.31
MRPL54Q6P161 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.1□□□□□ -0.31
MRPL54Q6P161 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.1□□□□□ -0.31
MRPL54Q6P161 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.1□□□□□ -0.31
MRPL54Q6P161 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.1□□□□□ -0.31
MRPL54Q6P161 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.1□□□□□ -0.31
MRPL54Q6P161 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
MRPL54Q6P161 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
MRPL54Q6P161 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
MRPL54Q6P161 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.1□□□□□ -0.31
MRPL54Q6P161 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL54Q6P161 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL54Q6P161 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.09□□□□□ -0.31
MRPL54Q6P161 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms