Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 GUSBP12-201ENST00000513727 720 ntBASIC15.06■□□□□ 0
ATPAF1Q5TC12 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 AC090616.6-201ENST00000582640 721 ntBASIC15.06■□□□□ 0
ATPAF1Q5TC12 AL121672.3-201ENST00000608644 468 ntBASIC15.06■□□□□ 0
ATPAF1Q5TC12 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 HLA-J-201ENST00000462773 1622 ntBASIC15.06■□□□□ 0
ATPAF1Q5TC12 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
ATPAF1Q5TC12 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ATPAF1Q5TC12 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ATPAF1Q5TC12 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.05■□□□□ 0
ATPAF1Q5TC12 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ATPAF1Q5TC12 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.05■□□□□ 0
ATPAF1Q5TC12 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ATPAF1Q5TC12 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
ATPAF1Q5TC12 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.05■□□□□ 0
ATPAF1Q5TC12 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
ATPAF1Q5TC12 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ATPAF1Q5TC12 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.05■□□□□ 0
ATPAF1Q5TC12 FLJ38576-201ENST00000623820 2459 ntBASIC15.05■□□□□ 0
ATPAF1Q5TC12 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ATPAF1Q5TC12 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.05■□□□□ 0
ATPAF1Q5TC12 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.05■□□□□ 0
ATPAF1Q5TC12 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
ATPAF1Q5TC12 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
ATPAF1Q5TC12 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
ATPAF1Q5TC12 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ATPAF1Q5TC12 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
ATPAF1Q5TC12 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
ATPAF1Q5TC12 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.05■□□□□ -0
ATPAF1Q5TC12 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ATPAF1Q5TC12 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.05■□□□□ -0
ATPAF1Q5TC12 BX276092.5-203ENST00000456199 560 ntBASIC15.05■□□□□ -0
ATPAF1Q5TC12 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.05■□□□□ -0
ATPAF1Q5TC12 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.05■□□□□ -0
ATPAF1Q5TC12 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.05■□□□□ -0
ATPAF1Q5TC12 AL358472.4-201ENST00000633140 710 ntBASIC15.05■□□□□ -0
ATPAF1Q5TC12 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.05■□□□□ -0
ATPAF1Q5TC12 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.05■□□□□ -0
ATPAF1Q5TC12 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
ATPAF1Q5TC12 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.05■□□□□ -0
ATPAF1Q5TC12 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
ATPAF1Q5TC12 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.05■□□□□ -0
ATPAF1Q5TC12 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.05■□□□□ -0
ATPAF1Q5TC12 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ATPAF1Q5TC12 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
ATPAF1Q5TC12 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.05■□□□□ -0
ATPAF1Q5TC12 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ATPAF1Q5TC12 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
ATPAF1Q5TC12 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
ATPAF1Q5TC12 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.05■□□□□ -0
ATPAF1Q5TC12 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
ATPAF1Q5TC12 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ATPAF1Q5TC12 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
ATPAF1Q5TC12 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ATPAF1Q5TC12 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.04■□□□□ -0
ATPAF1Q5TC12 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms