Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC58Q4VC31 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CCDC58Q4VC31 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CCDC58Q4VC31 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CCDC58Q4VC31 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC58Q4VC31 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC58Q4VC31 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC58Q4VC31 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC58Q4VC31 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC58Q4VC31 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC58Q4VC31 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC58Q4VC31 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC58Q4VC31 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.52■□□□□ 0.08
CCDC58Q4VC31 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 AC009154.2-201ENST00000621177 724 ntBASIC15.52■□□□□ 0.08
CCDC58Q4VC31 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CCDC58Q4VC31 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC58Q4VC31 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC58Q4VC31 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC58Q4VC31 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CCDC58Q4VC31 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC58Q4VC31 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC58Q4VC31 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC58Q4VC31 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC58Q4VC31 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.52■□□□□ 0.07
CCDC58Q4VC31 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 MIR1238-201ENST00000408483 83 ntBASIC15.51■□□□□ 0.07
CCDC58Q4VC31 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 AL390955.1-201ENST00000428694 934 ntBASIC15.51■□□□□ 0.07
CCDC58Q4VC31 AL158047.1-201ENST00000445918 881 ntBASIC15.51■□□□□ 0.07
CCDC58Q4VC31 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 AC024563.2-201ENST00000603282 481 ntBASIC15.51■□□□□ 0.07
CCDC58Q4VC31 AL157888.1-201ENST00000631930 593 ntBASIC15.51■□□□□ 0.07
CCDC58Q4VC31 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CCDC58Q4VC31 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC58Q4VC31 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC58Q4VC31 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CCDC58Q4VC31 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CCDC58Q4VC31 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC58Q4VC31 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms