Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 TOP3BP1-201ENST00000420768 1380 ntBASIC20.58■□□□□ 0.89
PDS5AQ29RF7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 AIRN-201ENST00000601203 4374 ntBASIC20.58■□□□□ 0.89
PDS5AQ29RF7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 AL121761.2-201ENST00000598007 1648 ntBASIC20.58■□□□□ 0.89
PDS5AQ29RF7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
PDS5AQ29RF7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
PDS5AQ29RF7 AL353732.1-201ENST00000569618 1459 ntBASIC20.58■□□□□ 0.88
PDS5AQ29RF7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDS5AQ29RF7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.58■□□□□ 0.88
PDS5AQ29RF7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDS5AQ29RF7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.58■□□□□ 0.88
PDS5AQ29RF7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.58■□□□□ 0.88
PDS5AQ29RF7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.58■□□□□ 0.88
PDS5AQ29RF7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDS5AQ29RF7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 AC002056.1-201ENST00000395613 760 ntBASIC20.57■□□□□ 0.88
PDS5AQ29RF7 HCG4-201ENST00000418983 998 ntBASIC20.57■□□□□ 0.88
PDS5AQ29RF7 RPS8P6-201ENST00000426177 609 ntBASIC20.57■□□□□ 0.88
PDS5AQ29RF7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 AC099522.2-201ENST00000607001 744 ntBASIC20.57■□□□□ 0.88
PDS5AQ29RF7 AL513210.1-201ENST00000629608 234 ntBASIC20.57■□□□□ 0.88
PDS5AQ29RF7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDS5AQ29RF7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 CNN2P11-201ENST00000429351 262 ntBASIC20.56■□□□□ 0.88
PDS5AQ29RF7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.56■□□□□ 0.88
PDS5AQ29RF7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 FRMD8P1-201ENST00000440433 1524 ntBASIC20.56■□□□□ 0.88
PDS5AQ29RF7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.56■□□□□ 0.88
PDS5AQ29RF7 LETM1P2-201ENST00000597330 2178 ntBASIC20.56■□□□□ 0.88
PDS5AQ29RF7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms