Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.67■□□□□ 0.42
GABPB1Q06547 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GABPB1Q06547 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABPB1Q06547 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GABPB1Q06547 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
GABPB1Q06547 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABPB1Q06547 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.66■□□□□ 0.42
GABPB1Q06547 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
GABPB1Q06547 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.66■□□□□ 0.42
GABPB1Q06547 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPB1Q06547 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.66■□□□□ 0.42
GABPB1Q06547 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
GABPB1Q06547 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
GABPB1Q06547 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPB1Q06547 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABPB1Q06547 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABPB1Q06547 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABPB1Q06547 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPB1Q06547 DDX43P3-201ENST00000441064 443 ntBASIC17.66■□□□□ 0.42
GABPB1Q06547 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.66■□□□□ 0.42
GABPB1Q06547 RPS2P52-201ENST00000469610 820 ntBASIC17.66■□□□□ 0.42
GABPB1Q06547 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.66■□□□□ 0.42
GABPB1Q06547 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.66■□□□□ 0.42
GABPB1Q06547 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.66■□□□□ 0.42
GABPB1Q06547 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.66■□□□□ 0.42
GABPB1Q06547 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.66■□□□□ 0.42
GABPB1Q06547 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
GABPB1Q06547 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.66■□□□□ 0.42
GABPB1Q06547 AC010536.3-201ENST00000620306 533 ntBASIC17.66■□□□□ 0.42
GABPB1Q06547 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
GABPB1Q06547 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.66■□□□□ 0.42
GABPB1Q06547 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.66■□□□□ 0.42
GABPB1Q06547 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
GABPB1Q06547 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPB1Q06547 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.66■□□□□ 0.42
GABPB1Q06547 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABPB1Q06547 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
GABPB1Q06547 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPB1Q06547 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.66■□□□□ 0.42
GABPB1Q06547 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPB1Q06547 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABPB1Q06547 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABPB1Q06547 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
GABPB1Q06547 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABPB1Q06547 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.66■□□□□ 0.42
GABPB1Q06547 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.65■□□□□ 0.42
GABPB1Q06547 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
GABPB1Q06547 AC015656.1-201ENST00000624209 3578 ntBASIC17.65■□□□□ 0.42
GABPB1Q06547 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABPB1Q06547 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GABPB1Q06547 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABPB1Q06547 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABPB1Q06547 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABPB1Q06547 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.65■□□□□ 0.42
GABPB1Q06547 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABPB1Q06547 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABPB1Q06547 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.65■□□□□ 0.42
GABPB1Q06547 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.65■□□□□ 0.42
GABPB1Q06547 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GABPB1Q06547 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
GABPB1Q06547 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.65■□□□□ 0.42
GABPB1Q06547 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.65■□□□□ 0.42
GABPB1Q06547 HLA-A-209ENST00000638375 975 ntBASIC17.65■□□□□ 0.42
GABPB1Q06547 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABPB1Q06547 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.65■□□□□ 0.42
GABPB1Q06547 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABPB1Q06547 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.65■□□□□ 0.42
GABPB1Q06547 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
GABPB1Q06547 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GABPB1Q06547 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
GABPB1Q06547 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABPB1Q06547 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABPB1Q06547 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABPB1Q06547 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABPB1Q06547 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
GABPB1Q06547 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABPB1Q06547 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
GABPB1Q06547 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GABPB1Q06547 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GABPB1Q06547 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GABPB1Q06547 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
GABPB1Q06547 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.64■□□□□ 0.42
GABPB1Q06547 AC005840.4-201ENST00000541242 2494 ntBASIC17.64■□□□□ 0.42
GABPB1Q06547 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
GABPB1Q06547 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
GABPB1Q06547 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GABPB1Q06547 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
GABPB1Q06547 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GABPB1Q06547 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
GABPB1Q06547 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GABPB1Q06547 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
GABPB1Q06547 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
GABPB1Q06547 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
GABPB1Q06547 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.64■□□□□ 0.41
GABPB1Q06547 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GABPB1Q06547 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.64■□□□□ 0.41
GABPB1Q06547 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.64■□□□□ 0.41
GABPB1Q06547 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.64■□□□□ 0.41
GABPB1Q06547 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
GABPB1Q06547 LINC01101-201ENST00000622953 1884 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms