Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.31■□□□□ 0.2
TRA2BP62995 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.31■□□□□ 0.2
TRA2BP62995 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.31■□□□□ 0.2
TRA2BP62995 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.31■□□□□ 0.2
TRA2BP62995 LINC01711-201ENST00000598340 967 ntBASIC16.31■□□□□ 0.2
TRA2BP62995 AL732292.2-201ENST00000609649 430 ntBASIC16.31■□□□□ 0.2
TRA2BP62995 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.31■□□□□ 0.2
TRA2BP62995 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.31■□□□□ 0.2
TRA2BP62995 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.31■□□□□ 0.2
TRA2BP62995 AC092053.1-201ENST00000605787 1936 ntBASIC16.31■□□□□ 0.2
TRA2BP62995 AL356309.3-201ENST00000624132 1934 ntBASIC16.31■□□□□ 0.2
TRA2BP62995 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.31■□□□□ 0.2
TRA2BP62995 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.3■□□□□ 0.2
TRA2BP62995 FRMD8P1-201ENST00000440433 1524 ntBASIC16.3■□□□□ 0.2
TRA2BP62995 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRA2BP62995 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 PKD1P1-201ENST00000458669 6805 ntBASIC16.3■□□□□ 0.2
TRA2BP62995 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRA2BP62995 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.3■□□□□ 0.2
TRA2BP62995 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.3■□□□□ 0.2
TRA2BP62995 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.3■□□□□ 0.2
TRA2BP62995 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.3■□□□□ 0.2
TRA2BP62995 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.3■□□□□ 0.2
TRA2BP62995 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.3■□□□□ 0.2
TRA2BP62995 AL355877.3-201ENST00000622820 899 ntBASIC16.3■□□□□ 0.2
TRA2BP62995 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TRA2BP62995 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRA2BP62995 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRA2BP62995 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.3■□□□□ 0.2
TRA2BP62995 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRA2BP62995 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.3■□□□□ 0.2
TRA2BP62995 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRA2BP62995 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 NCF1C-201ENST00000438382 1427 ntBASIC16.29■□□□□ 0.2
TRA2BP62995 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.29■□□□□ 0.2
TRA2BP62995 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRA2BP62995 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.29■□□□□ 0.2
TRA2BP62995 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRA2BP62995 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.29■□□□□ 0.2
TRA2BP62995 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.29■□□□□ 0.2
TRA2BP62995 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.29■□□□□ 0.2
TRA2BP62995 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TRA2BP62995 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.29■□□□□ 0.2
TRA2BP62995 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRA2BP62995 NKAPP1-205ENST00000585790 367 ntBASIC16.29■□□□□ 0.2
TRA2BP62995 MTDHP3-201ENST00000594186 672 ntBASIC16.29■□□□□ 0.2
TRA2BP62995 AL353135.1-201ENST00000606729 504 ntBASIC16.29■□□□□ 0.2
TRA2BP62995 REXO1L6P-202ENST00000619970 1078 ntBASIC16.29■□□□□ 0.2
TRA2BP62995 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.29■□□□□ 0.2
TRA2BP62995 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRA2BP62995 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRA2BP62995 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRA2BP62995 AC022211.2-201ENST00000585075 2527 ntBASIC16.28■□□□□ 0.2
TRA2BP62995 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRA2BP62995 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRA2BP62995 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRA2BP62995 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms