Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15□□□□□ -0.01
UBA52P62987 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
UBA52P62987 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15□□□□□ -0.01
UBA52P62987 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15□□□□□ -0.01
UBA52P62987 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15□□□□□ -0.01
UBA52P62987 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 KRT8P10-201ENST00000450021 1447 ntBASIC15□□□□□ -0.01
UBA52P62987 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.99□□□□□ -0.01
UBA52P62987 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
UBA52P62987 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
UBA52P62987 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
UBA52P62987 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
UBA52P62987 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 AC106886.4-201ENST00000623557 2502 ntBASIC14.99□□□□□ -0.01
UBA52P62987 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
UBA52P62987 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
UBA52P62987 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.99□□□□□ -0.01
UBA52P62987 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
UBA52P62987 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
UBA52P62987 UNC93B7-201ENST00000509439 705 ntBASIC14.99□□□□□ -0.01
UBA52P62987 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.99□□□□□ -0.01
UBA52P62987 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.99□□□□□ -0.01
UBA52P62987 AL136038.4-201ENST00000603606 1261 ntBASIC14.99□□□□□ -0.01
UBA52P62987 AC112497.1-201ENST00000624824 639 ntBASIC14.99□□□□□ -0.01
UBA52P62987 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.99□□□□□ -0.01
UBA52P62987 AL157888.1-201ENST00000631930 593 ntBASIC14.99□□□□□ -0.01
UBA52P62987 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.99□□□□□ -0.01
UBA52P62987 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.99□□□□□ -0.01
UBA52P62987 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
UBA52P62987 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
UBA52P62987 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
UBA52P62987 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 CROCCP2-202ENST00000412962 2773 ntBASIC14.99□□□□□ -0.01
UBA52P62987 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
UBA52P62987 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBA52P62987 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.99□□□□□ -0.01
UBA52P62987 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.98□□□□□ -0.01
UBA52P62987 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.98□□□□□ -0.01
UBA52P62987 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBA52P62987 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
UBA52P62987 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBA52P62987 AL096828.2-201ENST00000567259 1965 ntBASIC14.98□□□□□ -0.01
UBA52P62987 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBA52P62987 KRT18P1-202ENST00000452408 1331 ntBASIC14.98□□□□□ -0.01
UBA52P62987 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.98□□□□□ -0.01
UBA52P62987 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBA52P62987 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBA52P62987 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBA52P62987 AC068418.2-201ENST00000577309 3703 ntBASIC14.98□□□□□ -0.01
UBA52P62987 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBA52P62987 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
UBA52P62987 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBA52P62987 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBA52P62987 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.98□□□□□ -0.01
UBA52P62987 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBA52P62987 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
UBA52P62987 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
UBA52P62987 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
UBA52P62987 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBA52P62987 HLA-F-220ENST00000434407 884 ntBASIC14.98□□□□□ -0.01
UBA52P62987 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.98□□□□□ -0.01
UBA52P62987 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.98□□□□□ -0.01
UBA52P62987 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.98□□□□□ -0.01
UBA52P62987 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.98□□□□□ -0.01
UBA52P62987 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.98□□□□□ -0.01
UBA52P62987 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.98□□□□□ -0.01
UBA52P62987 AC079602.3-201ENST00000623931 403 ntBASIC14.98□□□□□ -0.01
UBA52P62987 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.98□□□□□ -0.01
UBA52P62987 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBA52P62987 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.98□□□□□ -0.01
UBA52P62987 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBA52P62987 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBA52P62987 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms