Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.21■□□□□ 0.03
SEC61A1P61619 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SEC61A1P61619 AC012313.10-201ENST00000623509 926 ntBASIC15.21■□□□□ 0.03
SEC61A1P61619 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEC61A1P61619 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEC61A1P61619 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEC61A1P61619 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEC61A1P61619 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEC61A1P61619 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEC61A1P61619 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEC61A1P61619 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SEC61A1P61619 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SEC61A1P61619 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SEC61A1P61619 AC008741.2-201ENST00000612792 3115 ntBASIC15.21■□□□□ 0.02
SEC61A1P61619 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.21■□□□□ 0.02
SEC61A1P61619 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.2■□□□□ 0.02
SEC61A1P61619 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SEC61A1P61619 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SEC61A1P61619 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.2■□□□□ 0.02
SEC61A1P61619 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SEC61A1P61619 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SEC61A1P61619 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SEC61A1P61619 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.2■□□□□ 0.02
SEC61A1P61619 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
SEC61A1P61619 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.2■□□□□ 0.02
SEC61A1P61619 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.2■□□□□ 0.02
SEC61A1P61619 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.2■□□□□ 0.02
SEC61A1P61619 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
SEC61A1P61619 MIR3180-1-201ENST00000580374 94 ntBASIC15.2■□□□□ 0.02
SEC61A1P61619 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.2■□□□□ 0.02
SEC61A1P61619 MIR3180-3-201ENST00000584616 94 ntBASIC15.2■□□□□ 0.02
SEC61A1P61619 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SEC61A1P61619 AP002414.4-201ENST00000589764 1148 ntBASIC15.2■□□□□ 0.02
SEC61A1P61619 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.2■□□□□ 0.02
SEC61A1P61619 AL390719.2-201ENST00000606993 987 ntBASIC15.2■□□□□ 0.02
SEC61A1P61619 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.2■□□□□ 0.02
SEC61A1P61619 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.2■□□□□ 0.02
SEC61A1P61619 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SEC61A1P61619 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SEC61A1P61619 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.2■□□□□ 0.02
SEC61A1P61619 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
SEC61A1P61619 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SEC61A1P61619 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.2■□□□□ 0.02
SEC61A1P61619 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SEC61A1P61619 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SEC61A1P61619 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SEC61A1P61619 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 AC106886.4-201ENST00000623557 2502 ntBASIC15.19■□□□□ 0.02
SEC61A1P61619 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 KRT18P55-202ENST00000578578 1546 ntBASIC15.19■□□□□ 0.02
SEC61A1P61619 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SEC61A1P61619 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.19■□□□□ 0.02
SEC61A1P61619 CHCHD2P8-201ENST00000429873 447 ntBASIC15.19■□□□□ 0.02
SEC61A1P61619 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.19■□□□□ 0.02
SEC61A1P61619 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.19■□□□□ 0.02
SEC61A1P61619 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 CLEC4GP1-201ENST00000596555 870 ntBASIC15.19■□□□□ 0.02
SEC61A1P61619 AC092329.2-201ENST00000598402 547 ntBASIC15.19■□□□□ 0.02
SEC61A1P61619 GPR32P1-201ENST00000601788 811 ntBASIC15.19■□□□□ 0.02
SEC61A1P61619 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.19■□□□□ 0.02
SEC61A1P61619 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SEC61A1P61619 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SEC61A1P61619 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms