Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.19□□□□□ -0.46
CKS1BP61024 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS1BP61024 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS1BP61024 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS1BP61024 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CKS1BP61024 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS1BP61024 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.19□□□□□ -0.46
CKS1BP61024 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS1BP61024 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CKS1BP61024 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS1BP61024 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC12.19□□□□□ -0.46
CKS1BP61024 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CKS1BP61024 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS1BP61024 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS1BP61024 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
CKS1BP61024 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS1BP61024 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS1BP61024 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS1BP61024 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CKS1BP61024 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS1BP61024 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS1BP61024 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS1BP61024 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS1BP61024 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
CKS1BP61024 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS1BP61024 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
CKS1BP61024 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.19□□□□□ -0.46
CKS1BP61024 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS1BP61024 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CKS1BP61024 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
CKS1BP61024 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.19□□□□□ -0.46
CKS1BP61024 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CKS1BP61024 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS1BP61024 AL121761.2-201ENST00000598007 1648 ntBASIC12.19□□□□□ -0.46
CKS1BP61024 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CKS1BP61024 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
CKS1BP61024 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.18□□□□□ -0.46
CKS1BP61024 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CKS1BP61024 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.18□□□□□ -0.46
CKS1BP61024 AL009178.2-201ENST00000597278 2719 ntBASIC12.18□□□□□ -0.46
CKS1BP61024 PHGDH-209ENST00000641074 1780 ntBASIC12.18□□□□□ -0.46
CKS1BP61024 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.18□□□□□ -0.46
CKS1BP61024 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CKS1BP61024 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CKS1BP61024 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CKS1BP61024 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.18□□□□□ -0.46
CKS1BP61024 ESRRAP1-201ENST00000400596 1257 ntBASIC12.18□□□□□ -0.46
CKS1BP61024 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.18□□□□□ -0.46
CKS1BP61024 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CKS1BP61024 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.18□□□□□ -0.46
CKS1BP61024 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.18□□□□□ -0.46
CKS1BP61024 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CKS1BP61024 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC12.18□□□□□ -0.46
CKS1BP61024 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.18□□□□□ -0.46
CKS1BP61024 AC130371.2-201ENST00000619443 611 ntBASIC12.18□□□□□ -0.46
CKS1BP61024 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.18□□□□□ -0.46
CKS1BP61024 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CKS1BP61024 AC138969.2-201ENST00000532739 9932 ntBASIC12.18□□□□□ -0.46
CKS1BP61024 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 FSCN1P1-201ENST00000568912 1481 ntBASIC12.18□□□□□ -0.46
CKS1BP61024 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.18□□□□□ -0.46
CKS1BP61024 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.18□□□□□ -0.46
CKS1BP61024 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.18□□□□□ -0.46
CKS1BP61024 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CKS1BP61024 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.18□□□□□ -0.46
CKS1BP61024 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CKS1BP61024 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS1BP61024 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CKS1BP61024 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS1BP61024 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.17□□□□□ -0.46
CKS1BP61024 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.17□□□□□ -0.46
CKS1BP61024 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CKS1BP61024 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.17□□□□□ -0.46
CKS1BP61024 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
CKS1BP61024 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.17□□□□□ -0.46
CKS1BP61024 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC12.17□□□□□ -0.46
CKS1BP61024 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS1BP61024 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CKS1BP61024 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS1BP61024 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms