Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.85■□□□□ 0.13
CDC42P60953 AC079328.2-201ENST00000561241 3354 ntBASIC15.85■□□□□ 0.13
CDC42P60953 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 CYP2T1P-202ENST00000641596 2535 ntBASIC15.85■□□□□ 0.13
CDC42P60953 TSPY14P-201ENST00000303979 915 ntBASIC15.85■□□□□ 0.13
CDC42P60953 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.85■□□□□ 0.13
CDC42P60953 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDC42P60953 SLC25A1P3-201ENST00000395415 828 ntBASIC15.85■□□□□ 0.13
CDC42P60953 AP000523.1-201ENST00000398242 1049 ntBASIC15.85■□□□□ 0.13
CDC42P60953 TSPY12P-201ENST00000421279 868 ntBASIC15.85■□□□□ 0.13
CDC42P60953 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.85■□□□□ 0.13
CDC42P60953 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.85■□□□□ 0.13
CDC42P60953 GCSHP5-201ENST00000443090 522 ntBASIC15.85■□□□□ 0.13
CDC42P60953 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.85■□□□□ 0.13
CDC42P60953 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.85■□□□□ 0.13
CDC42P60953 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.85■□□□□ 0.13
CDC42P60953 AC124947.2-201ENST00000547118 1133 ntBASIC15.85■□□□□ 0.13
CDC42P60953 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.85■□□□□ 0.13
CDC42P60953 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.85■□□□□ 0.13
CDC42P60953 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.85■□□□□ 0.13
CDC42P60953 AP000525.1-201ENST00000608286 694 ntBASIC15.85■□□□□ 0.13
CDC42P60953 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.85■□□□□ 0.13
CDC42P60953 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDC42P60953 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.85■□□□□ 0.13
CDC42P60953 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.85■□□□□ 0.13
CDC42P60953 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDC42P60953 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.85■□□□□ 0.13
CDC42P60953 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.85■□□□□ 0.13
CDC42P60953 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.85■□□□□ 0.13
CDC42P60953 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.85■□□□□ 0.13
CDC42P60953 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.84■□□□□ 0.13
CDC42P60953 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 AL391005.1-201ENST00000623953 2435 ntBASIC15.84■□□□□ 0.13
CDC42P60953 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
CDC42P60953 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDC42P60953 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.84■□□□□ 0.13
CDC42P60953 FLJ16779-201ENST00000612722 7638 ntBASIC15.84■□□□□ 0.13
CDC42P60953 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.84■□□□□ 0.13
CDC42P60953 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 AL390955.1-201ENST00000428694 934 ntBASIC15.84■□□□□ 0.13
CDC42P60953 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.84■□□□□ 0.13
CDC42P60953 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.84■□□□□ 0.13
CDC42P60953 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.84■□□□□ 0.13
CDC42P60953 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.84■□□□□ 0.13
CDC42P60953 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.84■□□□□ 0.13
CDC42P60953 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.84■□□□□ 0.13
CDC42P60953 PCDHB17P-201ENST00000539533 2393 ntBASIC15.84■□□□□ 0.13
CDC42P60953 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.84■□□□□ 0.13
CDC42P60953 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDC42P60953 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.84■□□□□ 0.13
CDC42P60953 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
CDC42P60953 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
CDC42P60953 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
CDC42P60953 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDC42P60953 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.83■□□□□ 0.13
CDC42P60953 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDC42P60953 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDC42P60953 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDC42P60953 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms